What’s new¶
Release history¶
Version 1.3.6 (5/11/23)¶
(Docker) Updated to python 3.11 basecontainer.
(Docker) Fixed testdocker.sh.
(package) Modernized install procedure.
Version 1.3.5 (1/11/23)¶
(capfromtcs) Fixed summary statistics outputs.
Version 1.3.4 (1/10/23)¶
(capfromtcs) Revert change to max_iter when specifying initialcenters.
Version 1.3.3 (1/10/23)¶
(capfromtcs) Changed intialization of kmeans from initialcenters, save more intermediate results.
(utils.py) Factored out some transition array calculations.
Version 1.3.2 (11/15/22)¶
(capfromtcs) Fixed a typo in specifying the initial k-means++ method.
(io) Updated libraries to match some changes in rapidtide.
Version 1.3.1 (11/10/22)¶
(capfromtcs) Added new option “–initialcenters” to allow specification of k-means cluster centers. This lets you reuse the CAPS as previous runs, but gets around the difficulty of reading back old models run under a different version of python or scikit-learn.
Version 1.3.0 (11/10/22)¶
(package) Removed rapidtide as a dependency by copying over the necessary support routines.
(Docker) Updated basecontainer to latest, switched over to using pip rather than mamba for env.
(docs) Corrected a problem that was causing readthedocs build to fail.
Version 1.2.3 (8/31/22)¶
(capfromtcs, clustercomp) Used newer, non-deprecated method to access nifti files with nibabel.
(package) Added docker and singularity test scripts.
(package) Reformatted several files with black.
(package) Made many (unsuccesful) attempts to get the documentation to build.
Version 1.2.2.5 (8/30/22)¶
(package) Bump to trigger github deployment.
Version 1.2.2.4 (8/30/22)¶
(package) Convert README.md to README.rst
Version 1.2.2.3 (8/30/22)¶
(package) Fixed Development status in setup.py
Version 1.2.2.2 (8/30/22)¶
(package) Syncing with rapidtide to try to get pypi deployment to work
Version 1.2.2.1 (8/29/22)¶
(package) Fixed versioneer installation.
Version 1.2.2 (8/29/22)¶
(package) Updated pyproject.toml and versioneer to try to fix pypi deployment.
Version 1.2.1 (8/22/22)¶
(Docker) Fixed Dockerfile error.
(package) Updated pypi authentication information.
Version 1.2.0 (8/22/22)¶
(Docker) Added Docker compatibility.
(package) Updated to match the current version of rapidtide.
(package) Added “refresh” script to simplify updates.
(package) Formatting changes.
(capfromtcs) Fixed import of joblib, updated to new NonCausalFilter calling conventions.
(clusternifti) Major overhaul. Added normalization, PCA and ICA dimensionality reduction, switched to argparse, added repeats.
(clustersort) New program to harmonize multiple cluster solutions.
(clusternifti, clustersort, supercluster) Harmonized mask specification arguments and internal variable names.
Version 1.1.0 (8/20/21)¶
(package) Move to versioneer.
Version 1.0.0 (2/15/17)¶
First release